Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU11366.1DNA-binding protein with HTH domain-containing protein. (389 aa)    
Predicted Functional Partners:
AKU11361.1
acyl-CoA dehydrogenase type 2.
 
   
 0.780
AKU11427.1
Hypothetical protein.
 
     0.747
AKU11358.1
Rieske (2Fe-2S) domain-containing protein.
 
     0.744
AKU11419.1
Hypothetical protein.
  
     0.739
AKU11376.1
Hypothetical protein.
 
     0.722
AKU11406.1
TesA protein.
  
   
 0.674
AKU11387.1
acyl-CoA dehydrogenase oxidoreductase.
  
   
 0.646
AKU11393.1
Hypothetical protein.
  
     0.638
AKU11373.1
Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase.
  
   
 0.621
AKU11367.1
Short-chain dehydrogenase of unknown substrate specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.562
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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