STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11371.1Endonuclease. (458 aa)    
Predicted Functional Partners:
AKU11370.1
Hypothetical protein.
 
  
 0.955
AKU12264.1
Hypothetical protein.
 
  
 0.867
AKU12326.1
Hypothetical protein.
 
  
 0.867
AKU12418.1
Conserved exported hypothetical protein.
 
  
 0.867
AKU12858.1
Hypothetical protein.
 
  
 0.867
AKU11360.1
Glycosyl hydrolase.
 
  
 0.829
AKU12262.1
Hypothetical protein.
 
  
 0.829
AKU12324.1
Glycosyl hydrolase.
 
  
 0.829
AKU12416.1
Hypothetical protein.
 
  
 0.829
AKU12856.1
BNR/Asp-box repeat-containing protein.
 
  
 0.829
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.