STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11402.1LuxR family transcriptional regulator. (387 aa)    
Predicted Functional Partners:
AKU11419.1
Hypothetical protein.
 
     0.781
AKU11427.1
Hypothetical protein.
 
     0.762
AKU11361.1
acyl-CoA dehydrogenase type 2.
  
   
 0.708
AKU11406.1
TesA protein.
 
   
 0.707
AKU11358.1
Rieske (2Fe-2S) domain-containing protein.
 
     0.706
AKU11393.1
Hypothetical protein.
  
     0.700
AKU11387.1
acyl-CoA dehydrogenase oxidoreductase.
  
   
 0.670
AKU11403.1
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.658
AKU11376.1
Hypothetical protein.
 
     0.640
AKU11373.1
Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase.
  
   
 0.613
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.