Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11465.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
AKU12932.1
Hypothetical protein.
  
     0.721
AKU14399.1
BssI.
  
     0.707
AKU13837.1
Hypothetical protein.
  
     0.661
AKU13988.1
Putative two-component system sensor protein.
  
     0.659
AKU12222.1
Di-heme cytochrome c peroxidase.
  
     0.651
AKU12847.1
Hypothetical protein.
  
     0.633
AKU10355.1
Di-heme cytochrome c.
  
     0.630
AKU12770.1
PAS/PAC sensor signal transduction histidine kinase.
  
     0.623
AKU13183.1
Hypothetical protein.
  
     0.595
AKU12601.1
Hypothetical protein.
 
     0.584
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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