Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11500.1Hypothetical protein. (356 aa)    
Predicted Functional Partners:
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.714
AKU14128.1
Hypothetical protein.
 
  
 0.685
AKU14170.1
Hypothetical protein.
 
  
 0.656
AKU11964.1
Tankyrase type protein.
 
     0.639
AKU10280.1
PASTA-related domain-containing protein.
 
     0.636
AKU11770.1
Hypothetical protein.
 
  
 0.615
AKU10185.1
Hypothetical protein.
 
 0.606
AKU13437.1
Hypothetical protein.
  
     0.596
AKU13641.1
cAMP phosphodiesterase.
 
 
   0.593
AKU10186.1
Hypothetical protein.
 
 0.583
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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