STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bzdMBzdM. (94 aa)    
Predicted Functional Partners:
AKU12780.1
Pyruvate oxidoreductase.
  
  
 0.909
bzdV
BzdV.
  
 
 0.843
bzdS
BzdS.
       0.766
AKU13166.1
Isocitrate dehydrogenase, NADP-dependent; Belongs to the monomeric-type IDH family.
  
  
 0.728
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
  
 0.689
bzdW
BzdW; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.680
bzdX
BzdX.
     
 0.633
bzdT
BzdT.
     
 0.623
bzdY
BzdY.
     
 0.621
AKU11160.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
  
  
 0.618
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.