Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bzdXBzdX. (355 aa)    
Predicted Functional Partners:
bzdY
BzdY.
 
 0.993
mbdY
Putative methyl-6-ketocyclohex-1-ene-1-carbonyl-CoA hydrolase.
 
 0.973
bzdW
BzdW; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.958
mbdW
methyl-cyclohex-1,5-diene-1-carbonyl-CoA hydratase.
  
 0.935
mbdX
Putative methyl-6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase.
  
  
 
0.909
AKU11369.1
6-oxo-cyclohex-1-ene-carbonyl-CoA hydrolase.
 
 0.893
bzdT
BzdT.
 
    0.844
AKU14504.1
BzdT protein.
 
    0.790
bzdO
BzdO.
 
     0.693
AKU14507.1
Benzoyl CoA reductase subunit.
 
     0.623
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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