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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11524.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
AKU11526.1
Hypothetical protein.
 
     0.907
AKU11527.1
Hypothetical protein.
 
     0.898
AKU11528.1
Hypothetical protein.
 
     0.890
AKU11525.1
CzcA family heavy metal efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.813
AKU11587.1
Hypothetical protein.
 
     0.770
AKU11618.1
Hypothetical protein.
  
     0.763
AKU11617.1
Hypothetical protein.
 
     0.762
AKU11585.1
Outer membrane efflux protein.
 
     0.761
AKU11619.1
Outer membrane efflux protein.
 
     0.761
AKU11586.1
Hypothetical protein.
 
     0.760
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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