Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11571.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
AKU11573.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.862
AKU11574.1
Putative outer membrane cation efflux protein.
 
 
 0.853
AKU11572.1
Copper/silver efflux system, membrane component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.848
AKU13856.1
Hypothetical protein.
  
     0.705
AKU11623.1
Hypothetical protein.
  
     0.691
AKU11620.1
Copper/silver efflux system, membrane component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.687
AKU13859.1
Copper/silver efflux system, membrane component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.686
AKU11622.1
Outer membrane efflux protein.
 
 
 0.670
AKU13857.1
Outer membrane efflux protein, resistance-nodulation-division (RND) family.
 
 
 0.615
AKU11625.1
Metal ion efflux outer membrane protein.
 
 
 0.492
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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