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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11585.1Outer membrane efflux protein. (420 aa)    
Predicted Functional Partners:
AKU11587.1
Hypothetical protein.
 
 0.965
AKU11586.1
Hypothetical protein.
 
 0.964
AKU11589.1
Hypothetical protein.
 
     0.926
AKU11588.1
CzcA family heavy metal efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.915
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 0.886
AKU11617.1
Hypothetical protein.
 
 0.876
AKU11526.1
Hypothetical protein.
 
 0.875
AKU11527.1
Hypothetical protein.
 
 0.869
AKU11618.1
Hypothetical protein.
 
 0.859
AKU11524.1
Hypothetical protein.
 
     0.761
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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