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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11603.1Response regulator. (156 aa)    
Predicted Functional Partners:
AKU12052.1
Response regulator receiver modulated diguanylate cyclase.
   
 0.899
AKU12065.1
Hypothetical protein.
   
 0.875
AKU10705.1
Diguanylate cyclase with PAS/PAC sensor.
 
 0.841
AKU12862.1
Hypothetical protein.
  
     0.770
AKU10216.1
Hypothetical protein.
   
 0.726
AKU11984.1
Diguanylate cyclase; Contains PAS/PAC and GAF sensors.
 
 0.693
AKU12542.1
Diguanylate cyclase/phosphodiesterase.
 
 0.684
AKU13615.1
Hypothetical protein.
  
 0.641
AKU11202.1
Hypothetical protein.
 
   
 0.614
AKU14532.1
Putative response regulator receiver modulated diguanylate cyclase/phosphodiesterase.
 
 0.608
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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