Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11605.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
AKU11604.1
protein-S-isoprenylcysteine methyltransferase.
 
    0.951
AKU11061.1
Hypothetical protein.
 
    0.795
AKU11606.1
Hypothetical protein.
       0.777
AKU11607.1
UbiE/COQ5 methyltransferase.
       0.671
AKU11608.1
Silver exporting P-type ATPase.
 
     0.627
AKU11629.1
Two component sensor regulator; Member of a two-component regulatory system.
 
     0.493
AKU13854.1
Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system.
 
     0.474
AKU11603.1
Response regulator.
       0.417
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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