Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11741.1Chain length determinant protein EpsF. (447 aa)    
Predicted Functional Partners:
AKU11740.1
Putative non-specific protein-tyrosine kinase EpsG-like protein.
  
 0.988
AKU11742.1
Polysaccharide export protein EpsE.
 
 
 0.976
AKU10724.1
Putative polysaccharide export protein.
  
 0.943
AKU10722.1
Putative polysaccharide export protein.
 
 
 0.942
AKU11739.1
Hypothetical protein.
 
     0.940
AKU13587.1
Exopolysaccharide biosynthesis protein.
  
 0.932
AKU13589.1
Polysaccharide export protein.
 
 
 0.924
AKU10718.1
Putative glycosyltransferase.
 
  
 0.921
AKU11747.1
Putative glycosyltransferase.
 
  
 0.921
AKU11743.1
EpsD family peptidyl-prolyl cis-trans isomerase.
 
    0.880
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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