STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11876.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
AKU11875.1
Hypothetical protein.
 
     0.952
AKU11877.1
Putative TonB-dependent receptor.
 
 
 
 0.845
AKU11878.1
Hypothetical protein.
       0.691
AKU13835.1
Long-chain N-acyl amino acid synthase.
  
     0.668
AKU12161.1
Hypothetical protein.
 
 
 0.657
AKU10982.1
TonB-dependent receptor.
  
 
  0.644
AKU13837.1
Hypothetical protein.
  
     0.599
AKU12134.1
Putative lipoprotein.
 
 
 0.518
AKU14205.1
Putative TonB-dependent receptor.
 
 
 
 0.517
AKU10844.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.