STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11877.1Putative TonB-dependent receptor. (701 aa)    
Predicted Functional Partners:
AKU11876.1
Hypothetical protein.
 
 
 
 0.845
AKU11878.1
Hypothetical protein.
       0.779
AKU12979.1
C-terminal TonB domain conaining protein.
  
 
 0.722
AKU13769.1
Putative TonB family protein.
  
 
 0.722
AKU13829.1
Hypothetical protein.
  
 
 0.722
AKU11875.1
Hypothetical protein.
 
     0.709
AKU10425.1
Transmembrane ABC transporter protein,permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.596
AKU14205.1
Putative TonB-dependent receptor.
  
     0.574
AKU13843.1
TonB-dependent receptor.
 
 
 0.506
AKU13450.1
Hypothetical protein.
  
 
 
 0.494
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.