Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU11881.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
AKU11882.1
Hypothetical protein.
 
  
 0.950
AKU11884.1
Glycosyltransferase family protein.
 
  
 0.927
AKU11739.1
Hypothetical protein.
    
 0.880
AKU13577.1
Exosortase 1.
    
 0.880
AKU11883.1
Glycosyltransferase family protein.
 
   
 0.861
AKU11885.1
Hypothetical protein.
 
   
 0.858
AKU13917.1
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
   
 0.784
AKU12429.1
Cytochrome P450.
  
 0.776
AKU12439.1
Hypothetical protein; Belongs to the cytochrome P450 family.
  
 0.776
AKU10916.1
AMP-dependent synthetase and ligase.
  
 0.695
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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