STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11896.1DNA internalization-related competence protein. (783 aa)    
Predicted Functional Partners:
AKU10775.1
Hypothetical protein.
 
  
 0.902
AKU09946.1
SMF protein, Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
  
 0.893
AKU13534.1
Type IV fimbrial biogenesis protein, prepilin cysteine protease; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.757
AKU13998.1
Flp pilus assembly protein, protease CpaA.
  
  
 0.757
AKU13110.1
DNA polymerase III, delta subunit.
 
   
 0.699
AKU11250.1
DNA protecting protein DprA.
  
  
 0.695
AKU12240.1
Complex sensory protein.
  
    0.684
AKU13175.1
DNA repair protein, RadC; Belongs to the UPF0758 family.
 
  
 0.682
AKU14559.1
Hypothetical protein.
  
  
 0.670
AKU12486.1
DNA repair protein.
 
  
 0.666
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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