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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11909.1Putative ABC transporter permease. (373 aa)    
Predicted Functional Partners:
AKU11908.1
ABC transporter.
 
 0.997
AKU11907.1
Hypothetical protein.
 
 0.995
AKU11941.1
ATPase component ABC-type transport system.
 
 0.989
AKU12147.1
Putative ABC transport system ATP-binding protein.
 
 0.989
AKU11940.1
Periplasmic component of ABC-type transport system.
 
 0.980
AKU12148.1
Hypothetical protein.
 
 0.980
AKU10550.1
ATP-binding ABC transporter protein.
 
 0.977
AKU10552.1
Putative signal peptide protein, toluene tolerance Ttg2C-like.
 
 0.975
AKU11906.1
Hypothetical protein.
 
  
 0.946
AKU10555.1
NTP-binding protein.
  
 0.936
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.