Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU11939.1Putative lipoprotein. (133 aa)    
Predicted Functional Partners:
AKU11940.1
Periplasmic component of ABC-type transport system.
 
   
 0.859
AKU11942.1
ABC transporter, permease protein.
 
     0.838
AKU11941.1
ATPase component ABC-type transport system.
 
   
 0.694
AKU14223.1
Hypothetical protein.
  
    0.614
AKU12070.1
Hypothetical protein.
  
    0.594
AKU10045.1
Hypothetical protein.
 
     0.586
AKU10044.1
Proline-rich region.
  
     0.583
AKU11875.1
Hypothetical protein.
 
     0.549
AKU11938.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.536
AKU14222.1
Hypothetical protein.
  
    0.471
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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