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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11940.1Periplasmic component of ABC-type transport system. (317 aa)    
Predicted Functional Partners:
AKU11942.1
ABC transporter, permease protein.
 
 0.995
AKU11941.1
ATPase component ABC-type transport system.
 
 0.994
AKU12146.1
Hypothetical protein.
 
 0.981
AKU11909.1
Putative ABC transporter permease.
 
 0.980
AKU11908.1
ABC transporter.
 
 0.979
AKU12147.1
Putative ABC transport system ATP-binding protein.
 
 0.977
AKU11907.1
Hypothetical protein.
  
  
 
0.926
AKU10551.1
Putative ABC transport system permease protein, organic solvent resistance ABC transporter permease.
  
 0.923
AKU12148.1
Hypothetical protein.
  
  
 
0.922
AKU10550.1
ATP-binding ABC transporter protein.
  
 0.912
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.