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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU11998.1Glucose-methanol-choline oxidoreductase. (533 aa)    
Predicted Functional Partners:
AKU13205.1
Putative iron-sulfur protein.
    
 0.910
AKU12212.1
Glucose-methanol-choline oxidoreductase.
  
  
 
0.905
AKU10110.1
Bifunctional protein Aas.
    
 0.811
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
 0.807
AKU10047.1
Hypothetical protein.
     
  0.800
AKU11999.1
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
       0.757
AKU09973.1
Hypothetical protein.
  
 
 0.694
AKU12765.1
WD-40 repeat protein.
  
 
 0.690
AKU13297.1
Hypothetical protein.
  
 
 0.686
AKU12001.1
CoA transferase small subunit B.
 
     0.621
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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