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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12012.1Rhodanese-like protein. (529 aa)    
Predicted Functional Partners:
AKU13034.1
Superoxide dismutase (Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.723
AKU10916.1
AMP-dependent synthetase and ligase.
  
 
 0.708
AKU12013.1
Hypothetical protein.
 
     0.639
AKU12025.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.604
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
  0.589
AKU12019.1
Hypothetical protein.
 
     0.587
AKU12014.1
Hypothetical protein.
 
     0.582
AKU13251.1
Molybdopterin biosynthesis protein MoeY.
   
 0.571
AKU13252.1
Hypothetical protein.
   
 0.571
AKU12016.1
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB).
 
     0.557
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.