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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12013.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
AKU12018.1
Hypothetical protein.
 
  
 0.934
AKU12019.1
Hypothetical protein.
 
  
 0.932
AKU14598.1
Hypothetical protein.
 
  
 0.891
AKU14599.1
Hypothetical protein.
 
  
 0.869
AKU12014.1
Hypothetical protein.
 
    
0.704
AKU12012.1
Rhodanese-like protein.
 
     0.639
AKU12016.1
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB).
 
     0.619
AKU12015.1
Enoyl-CoA hydratase/isomerase.
       0.607
AKU12017.1
phenylacetate--CoA ligase.
       0.542
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.