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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12016.1Glycine/sarcosine/betaine reductase selenoprotein B (GRDB). (323 aa)    
Predicted Functional Partners:
AKU12017.1
phenylacetate--CoA ligase.
       0.773
AKU12015.1
Enoyl-CoA hydratase/isomerase.
       0.686
AKU12019.1
Hypothetical protein.
 
     0.675
AKU12014.1
Hypothetical protein.
 
     0.674
AKU11186.1
Hypothetical protein.
  
     0.663
AKU14215.1
Hypothetical protein.
  
     0.647
AKU10732.1
Hypothetical protein.
  
     0.621
AKU12013.1
Hypothetical protein.
 
     0.619
AKU10123.1
Protein of unknown function (DUF4401) protein.
  
     0.600
AKU14089.1
Putative transmembrane sensor protein.
  
     0.590
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.