Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12016.1Glycine/sarcosine/betaine reductase selenoprotein B (GRDB). (323 aa)    
Predicted Functional Partners:
AKU12017.1
phenylacetate--CoA ligase.
       0.773
AKU12015.1
Enoyl-CoA hydratase/isomerase.
       0.686
AKU12019.1
Hypothetical protein.
 
     0.675
AKU12014.1
Hypothetical protein.
 
     0.673
AKU11186.1
Hypothetical protein.
  
     0.663
AKU14215.1
Hypothetical protein.
  
     0.647
AKU10732.1
Hypothetical protein.
  
     0.621
AKU12013.1
Hypothetical protein.
 
     0.618
AKU10123.1
Protein of unknown function (DUF4401) protein.
  
     0.600
AKU14089.1
Putative transmembrane sensor protein.
  
     0.590
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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