Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12018.1Hypothetical protein. (500 aa)    
Predicted Functional Partners:
AKU12019.1
Hypothetical protein.
 
  
 0.971
AKU12014.1
Hypothetical protein.
  
 0.948
AKU12013.1
Hypothetical protein.
 
  
 0.940
AKU14599.1
Hypothetical protein.
 
  
 0.912
AKU14598.1
Hypothetical protein.
  
  
 
0.905
AKU12022.1
Hypothetical protein.
 
  
 0.902
AKU14600.1
Hypothetical protein.
 
  
 0.902
AKU14601.1
Hypothetical protein.
 
  
 0.902
AKU12017.1
phenylacetate--CoA ligase.
  
    0.586
AKU12016.1
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB).
       0.584
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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