STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12040.1Putative spermidine/putrescine transport system substrate-binding protein. (385 aa)    
Predicted Functional Partners:
AKU12038.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.999
AKU12039.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.999
AKU12037.1
Spermidine/putrescine transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.997
AKU11776.1
Transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.946
AKU11725.1
Oligopeptide-binding protein oppA precursor.
  
 
 0.741
AKU10230.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.731
AKU13810.1
ABC transporter related protein.
     
 0.713
AKU10959.1
Polar amino acid ABC transporter; HisQ; inner membrane subunit, histidine transport system permease protein.
   
 
 0.709
AKU14153.1
ATP-binding ABC transporter protein.
     
 0.708
AKU11724.1
Oligopeptide transport system permease protein oppB.
    
 0.705
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.