Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKU12040.1Putative spermidine/putrescine transport system substrate-binding protein. (385 aa)    
Predicted Functional Partners:
AKU12038.1
Putative spermidine/putrescine transport system permease protein.
 
 0.999
AKU12039.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.998
AKU12037.1
Spermidine/putrescine transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.991
AKU11776.1
Transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.799
AKU12036.1
Creatinase/creatine amidinohydrolase.
 
  
 0.597
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
  
 0.595
AKU14153.1
ATP-binding ABC transporter protein.
     
 0.515
AKU13811.1
ABC transporter, permease protein.
     
 0.493
AKU12041.1
Hypothetical protein.
       0.492
AKU10987.1
Putative sulfonate ABC transporter, periplasmic sulfonate-binding protein.
  
  
 0.483
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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