Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU12044.1Transcriptional regulator, AraC family. (343 aa)    
Predicted Functional Partners:
AKU12026.1
Sarcosine oxidase delta subunit family protein.
 
  
 0.757
AKU12025.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
     0.752
AKU12024.1
Sarcosine oxidase gamma subunit family protein.
 
    0.747
AKU12027.1
Sarcosine oxidase beta subunit family protein.
  
     0.717
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
  
    0.557
AKU12036.1
Creatinase/creatine amidinohydrolase.
 
   
 0.548
AKU12043.1
Cytosine/purines uracil thiamine allantoin permease.
 
     0.476
AKU12042.1
Creatininase.
 
     0.471
AKU10263.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.446
AKU14190.1
AraC family transcriptional regulator.
 
 
 0.414
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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