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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12054.1ATPase component dipeptide/oligopeptide/nickel ABC transporter; Belongs to the ABC transporter superfamily. (699 aa)    
Predicted Functional Partners:
AKU11724.1
Oligopeptide transport system permease protein oppB.
 
 0.997
AKU11723.1
Oligopeptide transport system permease.
 
 0.996
AKU12932.1
Hypothetical protein.
  
 0.969
AKU11725.1
Oligopeptide-binding protein oppA precursor.
 
 
 0.952
cysA-2
Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
 
 
0.779
cysA
ATP-binding protein of thiosulfate ABC transporter; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
 
 
0.778
AKU13810.1
ABC transporter related protein.
  
  
  0.727
AKU13811.1
ABC transporter, permease protein.
  
  
 0.720
AKU10960.1
Polar amino acid ABC transporter; HisM; inner membrane subunit, histidine transport system permease protein.
  
  
  0.710
AKU12037.1
Spermidine/putrescine transport ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 
0.707
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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