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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12055.1FKBP-type peptidylprolyl isomerase. (159 aa)    
Predicted Functional Partners:
AKU13333.1
Subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenase.
   
 
 0.822
AKU12056.1
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen.
       0.816
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
 
 0.800
AKU14592.1
Hydrogenase accessory protein.
    
 
 0.771
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.755
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
    0.582
AKU12054.1
ATPase component dipeptide/oligopeptide/nickel ABC transporter; Belongs to the ABC transporter superfamily.
     
 0.573
lexA
SOS-response transcriptional repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
     
 0.564
AKU13165.1
Isocitrate dehydrogenase, NADP-dependent.
  
    0.478
AKU12946.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.456
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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