Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12070.1Hypothetical protein. (1261 aa)    
Predicted Functional Partners:
AKU13633.1
Hypothetical protein.
 
  
 0.811
AKU12069.1
Pterin-4-alpha-carbinolamine dehydratase.
       0.645
AKU10044.1
Proline-rich region.
  
     0.612
AKU11939.1
Putative lipoprotein.
  
    0.594
AKU11472.1
Hypothetical protein.
  
    0.547
AKU10298.1
Hypothetical protein.
  
     0.435
AKU10699.1
Protein porphyrin biosynthesis.
 
     0.411
AKU12133.1
Hypothetical protein.
  
  
 0.404
AKU12071.1
Hypothetical protein.
       0.403
AKU12072.1
Hypothetical protein.
       0.403
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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