Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12073.1Hypothetical protein. (420 aa)    
Predicted Functional Partners:
AKU12071.1
Hypothetical protein.
 
     0.956
AKU12998.1
Cytochrome-cbb3 oxidase subunit II.
  
 
 0.953
AKU12072.1
Hypothetical protein.
 
     0.949
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
   
 
 0.899
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
 
 0.899
AKU10182.1
Cytochrome c, class I.
  
 
 0.857
AKU13603.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.846
AKU12997.1
Cytochrome-cbb3 oxidase subunit.
  
  
 0.822
AKU10662.1
Cytochrome B subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.812
AKU10955.1
Cache sensor protein.
 
 
 0.779
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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