Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKU12097.1M14 family peptidase. (375 aa)    
Predicted Functional Partners:
AKU12098.1
Hypothetical protein; Belongs to the UPF0246 family.
       0.790
AKU10963.1
Arginine N-succinyltransferase.
  
     0.598
AKU10887.1
Dihydrolipoamide dehydrogenase.
   
  0.561
AKU10964.1
Arginine N-succinyltransferase.
  
     0.551
bioF
Aminotransferase class-I; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
     
 0.519
AKU12099.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.496
AKU11759.1
2-oxoglutarate dehydrogenase E1 component.
     
  0.469
AKU12181.1
Dihydrolipoamide dehydrogenase.
 
  
  0.428
AKU11761.1
Hypothetical protein.
  
     0.412
AKU13633.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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