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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12131.1Putative prolin-rich exported protein. (669 aa)    
Predicted Functional Partners:
AKU12130.1
Putative transcription termination factor Rho.
      0.890
AKU12600.1
Hypothetical protein.
  
     0.509
AKU14230.1
Dual specificity protein phosphatase.
  
   
 0.503
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.497
AKU13994.1
Hypothetical protein.
  
     0.487
AKU13450.1
Hypothetical protein.
  
 
 
 0.457
AKU10276.1
Hypothetical protein.
  
 
 
 0.453
AKU10493.1
Hypothetical protein.
 
  
 0.445
AKU11464.1
Hypothetical protein.
   
    0.440
AKU14125.1
Hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
   
 0.439
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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