Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12131.1Putative prolin-rich exported protein. (669 aa)    
Predicted Functional Partners:
AKU12130.1
Putative transcription termination factor Rho.
      0.890
AKU12600.1
Hypothetical protein.
  
     0.509
AKU14230.1
Dual specificity protein phosphatase.
  
     0.497
AKU13994.1
Hypothetical protein.
  
     0.487
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.474
AKU10493.1
Hypothetical protein.
 
  
 0.442
AKU14125.1
Hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
   
 0.434
AKU11464.1
Hypothetical protein.
   
    0.426
AKU13846.1
Hypothetical protein.
  
     0.417
AKU11985.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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