STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12158.1Merozoite surface protein 1 (MSP1) C-terminus. (186 aa)    
Predicted Functional Partners:
AKU12134.1
Putative lipoprotein.
 
 
 0.525
AKU12159.1
Hypothetical protein.
       0.522
AKU12157.1
DnaJ class protein.
   
   0.484
AKU12160.1
Hypothetical protein.
       0.481
AKU12971.1
DNA translocase FtsK.
   
 
 0.460
AKU13801.1
Hypothetical protein.
  
 0.445
AKU12156.1
Hypothetical protein.
       0.432
AKU12155.1
Hypothetical protein.
       0.426
AKU10029.1
Hypothetical protein.
   
 0.404
AKU10744.1
Outer membrane lipoprotein.
   
 0.404
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.