STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12160.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
AKU12159.1
Hypothetical protein.
       0.716
AKU12611.1
Hypothetical protein.
  
     0.527
AKU12158.1
Merozoite surface protein 1 (MSP1) C-terminus.
       0.481
AKU12608.1
Fusion of ABC transporter-type transmembrane and ATP binding protein.
  
     0.423
AKU12609.1
Putative prolyl cis-trans isomerase.
  
     0.414
AKU12610.1
Type I secretion protein.
  
     0.403
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.