Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKU12166.1Sigma-54 dependent transcriptional regulator. (444 aa)    
Predicted Functional Partners:
AKU14154.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.788
AKU12165.1
Hypothetical protein.
       0.710
AKU13461.1
Flagellar-like protein.
  
 
 0.464
AKU10867.1
Flagellar motor switch protein.
  
  
 0.461
fliP
Flagellar biosynthesis protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.446
AKU10868.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.438
AKU10866.1
Flagellar motor switch protein.
  
  
 0.436
AKU11477.1
Sensory transduction histidine kinase.
  
 
 0.436
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
  
 
 0.436
AKU12236.1
CheA signal transduction histidine kinase.
  
 
 0.434
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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