Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12180.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
AKU10810.1
Hypothetical protein.
  
     0.602
AKU13518.1
Hypothetical protein.
  
     0.594
AKU10052.1
Hypothetical protein.
  
     0.579
AKU13131.1
Lipoprotein.
  
     0.505
AKU10589.1
Hypothetical protein.
  
     0.489
AKU14046.1
Hypothetical protein.
  
     0.480
AKU13522.1
Hypothetical protein.
  
     0.459
AKU12176.1
Hypothetical protein.
 
     0.456
AKU10955.1
Cache sensor protein.
  
     0.447
AKU13127.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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