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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12187.1Hypothetical protein. (444 aa)    
Predicted Functional Partners:
AKU12188.1
Hypothetical protein.
 
     0.717
AKU12173.1
Beta-(1,2)-glucan production associated transmembrane protein.
 
 
 
 0.629
AKU12186.1
Hypothetical protein.
       0.617
AKU12175.1
Putative transport-associated protein.
 
     0.519
AKU11264.1
Hypothetical protein.
    
 0.477
AKU13325.1
Hypothetical protein.
 
     0.467
AKU10938.1
Hypothetical protein.
  
 0.463
AKU11193.1
CBS domain containing protein.
  
 0.463
AKU11770.1
Hypothetical protein.
  
 0.462
AKU14170.1
Hypothetical protein.
  
 0.462
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.