Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12193.1Transcriptional regulator. (138 aa)    
Predicted Functional Partners:
AKU12194.1
Poly(3-hydroxybutyrate) depolymerase.
 
     0.903
AKU11292.1
Hypothetical protein.
 
 
 0.858
AKU11400.1
Plasmid stabilization system protein.
  
 
 0.825
AKU13992.1
Hypothetical protein.
  
 
 0.825
AKU11404.1
Hypothetical protein.
  
 
 0.757
AKU12172.1
Phospholipase/carboxylesterase.
 
     0.713
AKU14264.1
N6-adenine-specific DNA methyltransferase, N12 class.
   
    0.542
AKU12192.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
       0.491
AKU10304.1
Silent information regulator protein Sir2.
   
    0.468
AKU12963.1
Silent information regulator protein Sir2.
   
    0.468
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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