AKU12215.1 protein (Azoarcus sp. CIB) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AKU12215.1

Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (477 aa)

Predicted Functional Partners:

AKU12257.1

0.901

AKU12212.1

0.801

AKU12214.1

0.786

AKU12213.1

0.781

AKU14053.1

0.464

AKU10670.1

0.459

AKU12780.1

0.457

AKU11760.1

0.455

AKU10661.1

0.423

AKU11610.1

0.423

Your Current Organism:

Azoarcus sp. CIB

NCBI taxonomy Id: 198107
Other names: A. sp. CIB

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKU10661.1	AKU11610.1	AzCIB_0756	AzCIB_1714	Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.902
AKU10661.1	AKU11760.1	AzCIB_0756	AzCIB_1865	Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Citrate synthase; Belongs to the citrate synthase family.	0.458
AKU10661.1	AKU12215.1	AzCIB_0756	AzCIB_2320	Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.423
AKU10661.1	AKU12257.1	AzCIB_0756	AzCIB_2362	Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.423
AKU10670.1	AKU11760.1	AzCIB_0765	AzCIB_1865	Bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Citrate synthase; Belongs to the citrate synthase family.	0.739
AKU10670.1	AKU12215.1	AzCIB_0765	AzCIB_2320	Bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.459
AKU10670.1	AKU12257.1	AzCIB_0765	AzCIB_2362	Bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.464
AKU10670.1	AKU12780.1	AzCIB_0765	AzCIB_2887	Bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Pyruvate oxidoreductase.	0.454
AKU10670.1	AKU14053.1	AzCIB_0765	AzCIB_4160	Bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	Glutamate synthase.	0.948
AKU11610.1	AKU10661.1	AzCIB_1714	AzCIB_0756	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.902
AKU11610.1	AKU11760.1	AzCIB_1714	AzCIB_1865	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Citrate synthase; Belongs to the citrate synthase family.	0.458
AKU11610.1	AKU12215.1	AzCIB_1714	AzCIB_2320	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.423
AKU11610.1	AKU12257.1	AzCIB_1714	AzCIB_2362	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.423
AKU11760.1	AKU10661.1	AzCIB_1865	AzCIB_0756	Citrate synthase; Belongs to the citrate synthase family.	Iron-sulfur subunit of cytochrome bc1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.458
AKU11760.1	AKU10670.1	AzCIB_1865	AzCIB_0765	Citrate synthase; Belongs to the citrate synthase family.	Bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.	0.739
AKU11760.1	AKU11610.1	AzCIB_1865	AzCIB_1714	Citrate synthase; Belongs to the citrate synthase family.	Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.458
AKU11760.1	AKU12215.1	AzCIB_1865	AzCIB_2320	Citrate synthase; Belongs to the citrate synthase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.455
AKU11760.1	AKU12257.1	AzCIB_1865	AzCIB_2362	Citrate synthase; Belongs to the citrate synthase family.	NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.455
AKU11760.1	AKU12780.1	AzCIB_1865	AzCIB_2887	Citrate synthase; Belongs to the citrate synthase family.	Pyruvate oxidoreductase.	0.947
AKU11760.1	AKU14053.1	AzCIB_1865	AzCIB_4160	Citrate synthase; Belongs to the citrate synthase family.	Glutamate synthase.	0.896