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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12219.1Radical SAM domain-containing protein. (332 aa)    
Predicted Functional Partners:
AKU12218.1
Type 11 methyltransferase.
   
 0.941
AKU12229.1
Hypothetical protein.
 
     0.821
AKU12228.1
Family 2 glycosyl transferase.
 
     0.814
AKU12227.1
Hypothetical protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
   
 0.664
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
 0.624
AKU12217.1
Pyridine nucleotide-disulfide oxidoreductase family protein.
 
  
 0.603
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
 
 0.539
AKU12220.1
Sulfate transporter.
       0.519
AKU12221.1
Hypothetical protein.
 
   
 0.453
AKU12084.1
Putative transcription regulator.
  
  
 0.446
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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