STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12223.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
AKU12222.1
Di-heme cytochrome c peroxidase.
 
     0.905
AKU12968.1
Hypothetical protein.
  
     0.564
AKU14399.1
BssI.
  
     0.550
AKU12225.1
Hypothetical protein.
 
     0.541
AKU13151.1
Hypothetical protein.
  
     0.529
AKU12224.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.471
AKU13837.1
Hypothetical protein.
  
     0.448
AKU10576.1
Hypothetical protein.
  
     0.439
AKU12555.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.