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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12227.1Hypothetical protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (756 aa)    
Predicted Functional Partners:
AKU12228.1
Family 2 glycosyl transferase.
 
   
 0.895
AKU12229.1
Hypothetical protein.
 
   
 0.894
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.878
gcvP-2
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.878
AKU12532.1
Hypothetical protein.
  
 0.856
AKU11759.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.855
bzdV
BzdV.
  
 0.845
AKU12230.1
Hypothetical protein.
 
     0.845
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
  
 0.835
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
  
 0.835
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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