STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12232.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
AKU09979.1
Hypothetical protein.
  
     0.674
AKU12234.1
Signal transduction histidine kinase.
 
     0.669
AKU14528.1
Hypothetical protein.
  
     0.637
AKU12238.1
CheW protein.
 
     0.628
AKU12233.1
Response regulator receiver modulated PAS/PAC sensor; Contains diguanylate cyclase/phosphodiesterase.
       0.601
cheB
Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
       0.601
AKU12237.1
Methyl-accepting chemotaxis sensory transducer.
 
     0.557
AKU12236.1
CheA signal transduction histidine kinase.
       0.556
AKU14216.1
Hypothetical protein.
  
     0.547
AKU12241.1
PAS/PAC sensor signal transduction histidine kinase.
 
     0.539
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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