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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12246.1Type II secretion system protein E. (746 aa)    
Predicted Functional Partners:
AKU10069.1
Type II secretion system protein F.
 
 
 0.919
AKU13245.1
Type II secretion system protein.
 
 
 0.919
AKU13532.1
Type IV fimbrial biogenesis protein.
 
 
 0.919
AKU13533.1
Type IV fimbrial biogenesis protein, pilC.
 
 
 0.919
AKU13534.1
Type IV fimbrial biogenesis protein, prepilin cysteine protease; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.873
AKU12248.1
Mutual gliding motility protein A.
 
   
 0.850
AKU12244.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
  
 
0.848
AKU12247.1
Putative histidine kinase.
 
 
 
 0.843
AKU12249.1
Response regulator receiver.
     
0.798
AKU12153.1
MCP methyltransferase/methylesterase, CheR/CheB.
  
 
 0.762
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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