Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12284.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
AKU12222.1
Di-heme cytochrome c peroxidase.
 
   
 0.652
AKU11589.1
Hypothetical protein.
  
     0.561
AKU10533.1
Hypothetical protein.
  
     0.543
AKU11586.1
Hypothetical protein.
  
    0.513
AKU12283.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.497
AKU11581.1
Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system.
 
     0.491
AKU11224.1
Nitric oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.449
AKU11585.1
Outer membrane efflux protein.
  
     0.449
AKU14363.1
Putative acyl-CoA dehydrogenase.
  
     0.440
AKU14399.1
BssI.
  
     0.428
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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