Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12298.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
AKU12299.1
Putative cytochrome c.
 
    0.868
AKU12297.1
ECF subfamily RNA polymerase, sigma-24 subunit; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.822
AKU12300.1
Calcineurin-like phosphoesterase.
 
     0.810
AKU13796.1
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 
 0.759
AKU12301.1
Lipoprotein.
 
   
 0.701
AKU11718.1
Hypothetical protein.
  
     0.537
AKU12291.1
Monovalent cation/H+ antiporter subunit A.
       0.530
AKU12092.1
Rubrerythrin/nigerythrin-like protein.
  
  
 0.524
AKU13011.1
Putative type 4 pilus biogenesis protein.
  
     0.500
AKU13009.1
Putative type 4 pilus biogenesis protein.
  
     0.483
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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