STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12301.1Lipoprotein. (400 aa)    
Predicted Functional Partners:
AKU12298.1
Hypothetical protein.
 
   
 0.712
AKU12299.1
Putative cytochrome c.
  
  
 0.683
AKU12300.1
Calcineurin-like phosphoesterase.
 
     0.672
AKU12297.1
ECF subfamily RNA polymerase, sigma-24 subunit; Belongs to the sigma-70 factor family. ECF subfamily.
       0.620
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.569
AKU10077.1
YVTN family beta-propeller repeat protein.
 
 
 0.500
AKU10182.1
Cytochrome c, class I.
 
  
 0.494
AKU13489.1
Cytochrome c-type.
  
 
 0.484
AKU12284.1
Hypothetical protein.
 
 
 0.454
AKU10762.1
Hypothetical protein.
   
    0.449
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.