Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU12304.1NNR-like transcriptional regulator. (254 aa)    
Predicted Functional Partners:
AKU12305.1
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
  
 0.699
AKU12989.1
Transcriptional regulator, Crp/Fnr family.
  
     0.691
AKU10133.1
Transcriptional regulator Dnr-type.
  
     0.676
AKU12972.1
Cyclic AMP receptor protein.
  
     0.659
AKU12307.1
Succinate dehydrogenase, cytochrome b556 subunit.
  
  
 0.640
AKU12306.1
Succinate dehydrogenase,hydrophobic membrane anchor protein.
       0.631
AKU11770.1
Hypothetical protein.
 
 0.569
acpR
Aromatic central pathway regulator.
  
     0.525
AKU11193.1
CBS domain containing protein.
 
 0.511
AKU11264.1
Hypothetical protein.
    
 0.510
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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