Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12317.1Hypothetical protein. (347 aa)    
Predicted Functional Partners:
AKU12338.1
Dioxygenase DitA oxygenase component small subunit.
 
 0.892
AKU12312.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
 
 0.887
AKU12318.1
Putative Rieske (2Fe-2S) protein.
 
     0.883
AKU12436.1
Protein DitP.
  
   
 0.763
AKU14310.1
TodC2.
  
 0.760
AKU12442.1
Protein DitK.
  
   
 0.753
AKU12332.1
DitK.
 
   
 0.742
AKU12320.1
Protein PtnO8.
  
  
 0.696
AKU12319.1
Alcohol dehydrogenase zinc-binding domain-containing protein.
       0.693
AKU12429.1
Cytochrome P450.
 
  
 0.661
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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